Improve past knowledge exploitation

Improve past knowledge exploitation: extract pairs of chemical compound and taxon from literature not present in LOTUS and relevant to the DBGI (papers describing phytochemical investigation of plants of the Swiss Botanical Gardens, e.g.

What was done on Plazi's side

About Plazi

Done for the BiCICKL TNA

  • Issues form 100 - 208
  • 1400 left to process
  • 900 papers in TreatmentBank

See :

Phytochemistry's Taxo Treatment extracted

Taxonomic Treatment example

(Alchornea rugosa (Lour.) Muell. Arg.)

Overall stats at Plazi

What was done on SIBILS's side



Example of a Phytochemistry paper treated by Plazi and SiBILS

Ask Donat and Deborah if they are overlappings papers that would be in BIODIVERSITY PMC ? Apparently this example is online in MEDLINE and the MEDLINE papers do not seem to benefit from the same treatment within SIBILS. Ask Deborah what are the differences ?

Enhance future knowledge dissemination

Enhance future knowledge dissemination: explore publication solutions to efficiently disseminate knowledge acquired from metabolomics, that is, putative occurrences of chemical structures in biological matrices (simple RDF triples, Nanopublications ( or similar).

What was done on KnowledgePixel's side


Class Plazi

Google drive folder

SIBILS slides